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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
ChIP-seq
114
total RNA-seq
38
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
0
CRISPR RNA-seq
Assay category
114
Transcription
Date released
84
May, 2021
February, 2021
15
February, 2018
7
August, 2021
4
February, 2023
2
March, 2020
2
October, 2019
Available data
105
bam
105
bigWig
105
tsv
15
fastq
Organism
114
Homo sapiens
Biosample type
587
tissue
246
primary cell
114
in vitro differentiated cells
35
cell line
1
stem cell
Organ
6
embryo
5
connective tissue
2
epithelium
1
heart
Project
114
AMP
Genome assembly (visualization)
105
GRCh38
105
hg19
Lab
109
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
71
inconsistent ontology term
month_released!
February, 2021
BIOSAMPLE
ASSAY
114 results
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total RNA-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
embryonic stem cell
7
neural progenitor cell
7
pancreatic endoderm
4
cardiomyocytes (cardiac muscle cell)
3
definitive endodermal cell
2
endocrine cell
2
immature adipocyte
2
posterior foregut
2
primitive gut cell
2
adipocyte
1
cardiac fibroblast
1
cardiac precursors (cardiac muscle cell)
1
endothelial cell
1
hematopoietic multipotent progenitor cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
islet precursor cell
1
lymphocyte of B lineage (iPSC)
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
preadipocyte
1
smooth muscle cell
1
stem cell
1
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