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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
43
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
74
Transcription
3
3D chromatin structure
Date released
545
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
77
August, 2021
52
July, 2019
35
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
25
March, 2020
22
November, 2019
16
September, 2020
15
February, 2018
6
April, 2018
5
December, 2019
5
January, 2019
4
November, 2020
3
October, 2022
2
October, 2018
1
December, 2018
1
March, 2019
1
March, 2023
1
May, 2023
Available data
49
txt
25
tsv
15
bam
15
bigWig
2
bedpe bed3+
2
hic
Organism
77
Homo sapiens
Biosample type
52
tissue
18
cell line
7
in vitro differentiated cells
Organ
50
kidney
10
liver
8
embryo
2
pancreas
Project
77
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
50
Katalin Susztak, Upenn
15
AMP-T2D consortium
12
Bing Ren, UCSD
BIOSAMPLE
ASSAY
77 results
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total RNA-seq
Hi-C
tissue
kidney
49
1
islet of Langerhans
1
1
cell line
HepG2
9
1
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
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