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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
43
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
180
Transcription
3
3D chromatin structure
Date released
563
February, 2021
190
May, 2020
183
August, 2021
182
May, 2021
168
July, 2018
94
February, 2023
89
August, 2017
60
May, 2022
56
September, 2020
55
July, 2019
49
April, 2018
47
September, 2023
35
October, 2019
27
September, 2018
25
February, 2020
25
March, 2020
22
November, 2019
15
February, 2018
9
April, 2020
8
December, 2019
5
January, 2019
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
December, 2018
1
March, 2019
1
March, 2023
1
November, 2018
Available data
123
tsv
57
txt
15
bam
15
bigWig
2
bedpe bed3+
2
hic
Organism
183
Homo sapiens
Biosample type
158
tissue
18
cell line
7
in vitro differentiated cells
Organ
92
heart
58
kidney
10
liver
8
embryo
6
blood vessel
6
vasculature
2
artery
2
pancreas
Project
183
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
113
AMP-T2D consortium
58
Katalin Susztak, Upenn
12
Bing Ren, UCSD
BIOSAMPLE
ASSAY
183 results
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single cell RNA-seq
total RNA-seq
Hi-C
tissue
kidney
8
49
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
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cell line
HepG2
9
1
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
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