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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
242
ChIP-seq
30
total RNA-seq
22
ATAC-seq
10
DNase-seq
5
Hi-C
4
pCHi-C
1
FAIRE-seq
0
shRNA RNA-seq
Assay category
30
Transcription
Date released
545
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
74
August, 2021
44
July, 2019
30
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
15
March, 2020
6
April, 2018
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
March, 2023
1
May, 2023
Available data
16
bam
16
bigWig
16
tsv
Organism
30
Homo sapiens
Biosample type
22
tissue
4
cell line
2
in vitro differentiated cells
2
primary cell
Organ
14
eye
6
kidney
4
limb
4
nerve
3
epithelium
2
heart
1
brain
1
liver
Project
30
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
30
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
30 results
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Clear Filters
total RNA-seq
tissue
islet of Langerhans
14
tibial nerve
4
heart
2
brain
1
liver
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
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