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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
145
total RNA-seq
100
single cell RNA-seq
51
ATAC-seq
12
DNase-seq
11
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
145
Transcription
11
DNA methylation
Date released
93
August, 2017
26
September, 2018
15
February, 2018
7
November, 2018
6
May, 2022
5
January, 2019
2
July, 2018
2
October, 2018
Available data
1217
tsv
1202
bam
1197
bigWig
156
fastq
59
txt
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3+
Organism
156
Homo sapiens
Biosample type
107
tissue
28
primary cell
15
in vitro differentiated cells
6
cell line
Organ
129
pancreas
28
epithelium
7
liver
4
embryo
3
adipose tissue
3
connective tissue
2
spleen
Project
156
AMP
98
HPAP
Genome assembly (visualization)
148
GRCh38
139
hg19
Lab
150
AMP-T2D consortium
6
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
156 results
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total RNA-seq
WGBS
tissue
islet of Langerhans
97
adipose tissue
3
body of pancreas
2
pancreas
2
spleen
2
+ See 1 more…
primary cell
pancreatic alpha cell
10
pancreatic beta cell
10
pancreatic acinar cell
4
pancreatic ductal cell
4
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
cell line
HepG2
5
1
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