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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
391
ChIP-seq
277
total RNA-seq
101
ATAC-seq
100
single cell RNA-seq
30
DNase-seq
2
small RNA-seq
1
FAIRE-seq
1
pCHi-C
Assay category
277
Transcription
Date released
131
May, 2021
45
May, 2020
26
September, 2018
23
February, 2021
15
February, 2018
13
July, 2019
7
August, 2021
5
December, 2019
4
November, 2020
4
October, 2019
2
March, 2020
2
October, 2018
Available data
279
bigWig
277
bam
277
tsv
135
fastq
2
bed bed3+
Organism
277
Homo sapiens
Biosample type
tissue
150
primary cell
127
in vitro differentiated cells
cell line
Organ
42
epithelium
28
pancreas
15
connective tissue
6
embryo
6
kidney
5
heart
5
liver
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
181
AMP
96
T1D
Genome assembly (visualization)
277
GRCh38
277
hg19
Lab
181
AMP-T2D consortium
96
Kyle Gaulton, UCSD
Audit category:
91
inconsistent ontology term
biosample_type!
tissue
cell line
BIOSAMPLE
ASSAY
277 results
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total RNA-seq
primary cell
monocyte
53
pancreatic alpha cell
10
pancreatic beta cell
10
hepatocyte
5
osteoblast
5
+ See 42 more…
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
neural progenitor cell
7
adipocyte
4
+ See 19 more…
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