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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
ChIP-seq
136
total RNA-seq
42
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Assay category
136
Transcription
4
3D chromatin structure
Date released
84
May, 2021
22
February, 2021
15
February, 2018
7
August, 2021
4
February, 2023
4
March, 2020
4
October, 2019
Available data
127
bam
127
bigWig
127
tsv
15
fastq
4
bedpe bed3+
4
hic
Organism
140
Homo sapiens
Biosample type
1053
tissue
257
primary cell
140
in vitro differentiated cells
117
cell line
Organ
9
connective tissue
6
embryo
2
epithelium
1
heart
Project
140
AMP
Genome assembly (visualization)
131
hg19
127
GRCh38
Lab
135
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
93
inconsistent ontology term
BIOSAMPLE
ASSAY
140 results
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total RNA-seq
Hi-C
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
1
induced pluripotent stem cell
9
embryonic stem cell
7
neural progenitor cell
7
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