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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
283
total RNA-seq
218
ChIP-seq
152
ATAC-seq
51
WGBS
37
single cell RNA-seq
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
283
Transcription
Date released
July, 2018
89
August, 2017
42
February, 2023
41
May, 2021
26
February, 2021
26
September, 2018
20
November, 2019
16
September, 2020
6
April, 2018
6
May, 2022
5
March, 2020
2
July, 2019
2
October, 2018
1
August, 2021
1
February, 2020
Available data
220
bam
216
tsv
214
bigWig
182
fastq
6
txt
Organism
283
Homo sapiens
Biosample type
169
tissue
81
primary cell
33
cell line
Organ
474
connective tissue
398
adipose tissue
283
pancreas
189
liver
131
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
221
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
214
GRCh38
214
hg19
Lab
217
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
33
inconsistent ontology term
month_released!
July, 2018
BIOSAMPLE
ASSAY
283 results
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Clear Filters
total RNA-seq
tissue
islet of Langerhans
164
body of pancreas
3
pancreas
2
primary cell
pancreatic alpha cell
52
pancreatic beta cell
21
pancreatic acinar cell
4
pancreatic ductal cell
4
cell line
EndoC_BH1
33
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