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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
84
RNA microarray
27
snATAC-seq
22
ATAC-seq
18
single cell RNA-seq
8
ChIP-seq
6
WGBS
3
snDrop-seq
2
pCHi-C
Assay category
545
Transcription
27
DNA accessibility
Date released
572
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
95
February, 2023
89
August, 2017
80
August, 2021
48
May, 2022
44
July, 2019
30
October, 2019
26
September, 2018
25
February, 2020
20
November, 2019
16
January, 2021
16
September, 2020
15
February, 2018
15
March, 2020
10
April, 2020
6
April, 2018
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
August, 2022
1
May, 2023
Available data
545
bam
545
bigWig
545
tsv
27
fastq
Organism
572
Homo sapiens
Biosample type
444
tissue
78
cell line
28
primary cell
22
in vitro differentiated cells
Organ
449
connective tissue
386
adipose tissue
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
26
epithelium
26
pancreas
Project
545
AMP
27
HPAP
Genome assembly (visualization)
545
GRCh38
545
hg19
Lab
545
AMP-T2D consortium
27
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
27
audit script error
BIOSAMPLE
ASSAY
572 results
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Clear Filters
total RNA-seq
snATAC-seq
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
primary cell
Langerhans cell
27
osteoblast
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
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