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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
975
total RNA-seq
867
ChIP-seq
248
ATAC-seq
178
DNase-seq
174
single cell RNA-seq
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
RNA microarray
3
snDrop-seq
Assay category
975
Transcription
Date released
386
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
50
August, 2021
39
May, 2021
31
July, 2019
26
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
9
February, 2023
9
March, 2020
6
April, 2018
1
May, 2023
Available data
873
tsv
849
bam
843
bigWig
103
fastq
55
txt
Organism
975
Homo sapiens
Biosample type
975
tissue
247
primary cell
136
in vitro differentiated cells
113
cell line
Organ
455
connective tissue
397
adipose tissue
289
pancreas
170
liver
bone element
50
kidney
19
eye
17
brain
15
heart
7
blood vessel
7
limb
7
vasculature
5
musculature of body
5
nerve
4
skeleton
2
artery
2
epithelium
1
spinal cord
Project
968
AMP
7
T1D
Genome assembly (visualization)
844
GRCh38
844
hg19
Lab
893
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
bone element
BIOSAMPLE
ASSAY
975 results
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Clear Filters
total RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
liver
167
kidney
49
subcutaneous adipose tissue
7
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