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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
73
ChIP-seq
6
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Assay category
398
Transcription
73
DNA binding
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
17
transcription factor
12
narrow histone mark
5
RNA binding protein
Date released
386
February, 2021
50
August, 2017
23
October, 2018
9
July, 2019
2
February, 2020
1
May, 2023
Available data
432
bam
414
bigWig
397
tsv
37
fastq
8
tagAlign
7
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
1
bed broadPeak
Organism
471
Homo sapiens
Biosample type
470
tissue
1
primary cell
Organ
741
liver
627
connective tissue
621
pancreas
471
adipose tissue
260
epithelium
235
brain
206
heart
163
vasculature
160
blood vessel
112
kidney
90
artery
73
limb
62
bone element
60
blood
60
bodily fluid
45
musculature of body
40
nerve
embryo
24
eye
20
spleen
17
vein
4
gonad
4
ovary
4
skeleton
1
lymph node
1
pericardium
1
pituitary gland
1
spinal cord
Project
471
AMP
Genome assembly (visualization)
415
hg19
414
GRCh38
Lab
471
AMP-T2D consortium
Audit category:
12
missing controlled_by
organ_slims!
embryo
BIOSAMPLE
ASSAY
471 results
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total RNA-seq
ChIP-seq
tissue
adipose tissue
382
2
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
7
12
omental fat pad
5
11
white adipose tissue
12
+ See 1 more…
primary cell
mesenchymal stem cell of adipose
1
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