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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
171
total RNA-seq
154
ATAC-seq
152
single cell RNA-seq
64
snATAC-seq
58
ChIP-seq
47
WGBS
10
MeRIP-seq
8
Hi-C
5
STARR-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
171
Transcription
Date released
76
February, 2023
59
August, 2021
20
May, 2022
16
September, 2020
Available data
92
fastq
49
txt
10
tsv
Organism
171
Homo sapiens
Biosample type
92
primary cell
70
tissue
9
cell line
Organ
54
pancreas
53
epithelium
49
kidney
29
liver
Project
92
HPAP
79
AMP
Lab
AMP-T2D consortium
Kyle Gaulton, UCSD
92
Klaus Kaestner, Upenn
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
10
Bing Ren, UCSD
organ_slims!
vasculature
lab.title!
Kyle Gaulton, UCSD
AMP-T2D consortium
BIOSAMPLE
ASSAY
171 results
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total RNA-seq
primary cell
pancreatic alpha cell
42
exocrine cell
39
pancreatic beta cell
11
tissue
kidney
49
liver
20
islet of Langerhans
1
cell line
HepG2
9
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