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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
141
DNase-seq
121
ChIP-seq
106
single cell RNA-seq
68
total RNA-seq
16
ATAC-seq
10
small RNA-seq
2
Hi-C
2
WGBS
2
snATAC-seq
Assay category
68
Transcription
Date released
18
February, 2021
14
February, 2018
14
July, 2019
13
May, 2021
4
February, 2023
4
October, 2019
1
November, 2019
Available data
63
bam
63
bigWig
63
tsv
14
fastq
4
txt
Organism
68
Homo sapiens
Biosample type
43
in vitro differentiated cells
19
tissue
5
primary cell
1
cell line
Organ
6
embryo
5
brain
5
epithelium
4
bone element
4
heart
4
skeleton
3
connective tissue
3
kidney
2
liver
2
pancreas
1
musculature of body
1
pericardium
Project
68
AMP
Genome assembly (visualization)
63
GRCh38
63
hg19
Lab
67
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
25
inconsistent ontology term
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
+ See 13 more…
tissue
heart
3
liver
2
acetabular part of hip bone
1
brain
1
cerebellum
1
+ See 11 more…
primary cell
embryonic stem cell
1
glomerular endothelial cell
1
kidney epithelial cell
1
mesangial cell
1
pericardium fibroblast
1
cell line
EndoC_BH1
1
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