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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
4
GRO-seq
1
pCHi-C
Assay category
18
DNA binding
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
February, 2018
5
August, 2017
5
December, 2017
4
January, 2018
1
August, 2018
Available data
26
bam
23
fastq
22
tagAlign
16
bigWig
7
bed bedgraph
7
bedpe bed3+
6
bed bed3+
5
bed bed3
4
bed narrowPeak
4
hic
4
tsv
3
txt
2
bigBed narrowPeak
2
ibed
0
bigBed broadPeak
Organism
23
Homo sapiens
Biosample type
182
primary cell
106
cell line
97
tissue
23
in vitro differentiated cells
1
stem cell
Organ
8
embryo
6
connective tissue
3
epithelium
1
adipose tissue
1
liver
Project
23
AMP
Genome assembly (visualization)
GRCh38
118
hg19
4
hg18
Lab
23
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
GRCh38
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
GRO-seq
pCHi-C
in vitro differentiated cells
pancreatic endoderm
5
1
adipocyte
5
Hepatic endoderm
2
definitive endodermal cell
1
1
primitive gut cell
1
1
Posterior foregut
1
embryonic stem cell
1
endocrine cell
1
hepatocyte
1
posterior foregut
1
white fat cell
1
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