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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
total RNA-seq
20
ATAC-seq
11
single cell RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
80
Transcription
26
DNA accessibility
1
3D chromatin structure
Date released
64
August, 2021
40
May, 2022
3
May, 2023
Available data
57
txt
20
bed narrowPeak
20
bigWig
1
hic
Organism
107
Homo sapiens
Biosample type
107
tissue
Organ
67
kidney
40
liver
Project
107
AMP
Genome assembly (visualization)
GRCh38
21
hg19
Lab
577
AMP-T2D consortium
314
Klaus Kaestner, Upenn
93
Kyle Gaulton, UCSD
67
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
19
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
assembly!
GRCh38
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
107 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
49
11
6
1
liver
20
20
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