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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
snATAC-seq
Assay category
52
Transcription
41
DNA methylation
39
DNA accessibility
Date released
113
May, 2022
19
September, 2020
Available data
433
bam
380
fastq
239
bigWig
200
tsv
185
bed narrowPeak
160
txt
152
tagAlign
132
zippedFastqFolder
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
14
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
132
Homo sapiens
Biosample type
132
primary cell
Organ
80
epithelium
80
pancreas
Project
132
HPAP
Lab
132
Klaus Kaestner, Upenn
assembly!
GRCh38
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
132 results
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single cell RNA-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
52
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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