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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
31
ATAC-seq
12
ChIP-seq
9
pCHi-C
6
MeRIP-seq
5
Hi-C
3
total RNA-seq
2
Capture-C
2
RRBS
2
single cell RNA-seq
1
STARR-seq
Assay category
31
DNA accessibility
Date released
16
May, 2021
9
February, 2023
4
May, 2020
2
March, 2020
Available data
7
bigWig
7
tsv
4
bam
2
bed bed3+
1
bed bedgraph
1
bed narrowPeak
1
txt
Organism
31
Homo sapiens
Biosample type
18
cell line
10
primary cell
3
in vitro differentiated cells
Organ
18
epithelium
18
pancreas
2
connective tissue
Project
31
AMP
Genome assembly (visualization)
20
hg19
GRCh38
Lab
30
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
31
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
31 results
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ATAC-seq
cell line
EndoC_BH1
18
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
in vitro differentiated cells
immature adipocyte
2
neuron cell of Hypothalamus (neuron)
1
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