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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ATAC-seq
6
MeRIP-seq
2
Capture-C
2
ChIP-seq
1
Hi-C
Assay category
18
DNA accessibility
2
DNA binding
1
3D chromatin structure
Target of assay
5
control
3
nucleotide modification
Date released
16
May, 2021
6
November, 2020
3
November, 2019
2
August, 2021
2
March, 2020
Available data
2
bam
2
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
29
Homo sapiens
Biosample type
29
cell line
Organ
84
bone element
34
epithelium
29
pancreas
8
connective tissue
8
kidney
2
embryo
2
heart
1
brain
1
musculature of body
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
55
hg19
GRCh38
Lab
23
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
29
inconsistent ontology term
4
audit script error
assembly!
GRCh38
BIOSAMPLE
ASSAY
29 results
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ATAC-seq
MeRIP-seq
Capture-C
ChIP-seq
Hi-C
cell line
EndoC_BH1
18
6
2
2
1
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