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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
4
Hi-C
3
total RNA-seq
1
pCHi-C
Assay category
19
DNA binding
4
3D chromatin structure
3
Transcription
Target of assay
17
control
2
histone
2
histone modification
2
narrow histone mark
Date released
17
October, 2019
4
July, 2019
3
February, 2020
2
May, 2019
1
March, 2020
Available data
18
bam
4
tsv
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
257
liver
157
pancreas
141
kidney
124
heart
111
connective tissue
92
bone element
67
adipose tissue
62
brain
53
eye
49
epithelium
40
musculature of body
30
blood vessel
30
vasculature
26
limb
20
lung
13
artery
12
nerve
9
spleen
8
embryo
8
skeleton
7
blood
7
bodily fluid
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
GRCh38
96
hg19
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
biosample_type!
primary cell
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
Hi-C
total RNA-seq
pCHi-C
tissue
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
4
1
muscle of leg
2
bladder (urinary bladder)
1
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