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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
4
GRO-seq
Assay category
12
DNA accessibility
Date released
5
May, 2021
4
January, 2018
3
February, 2023
2
August, 2021
2
October, 2019
Available data
26
bam
23
fastq
22
tagAlign
16
bigWig
7
bed bedgraph
7
bedpe bed3+
6
bed bed3+
5
bed bed3
4
bed narrowPeak
4
hic
4
tsv
3
txt
2
bigBed narrowPeak
2
ibed
Organism
16
Homo sapiens
Biosample type
94
primary cell
68
cell line
60
tissue
16
in vitro differentiated cells
1
stem cell
Organ
4
connective tissue
1
embryo
Project
16
AMP
Genome assembly (visualization)
254
hg19
GRCh38
4
hg18
Lab
6
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
GRO-seq
in vitro differentiated cells
embryonic stem cell
6
adipocyte
3
Posterior foregut
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
definitive endodermal cell
1
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