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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
17
ChIP-seq
3
Hi-C
3
pCHi-C
3
total RNA-seq
2
WGBS
1
RRBS
Assay category
96
Transcription
17
DNA binding
3
3D chromatin structure
3
DNA methylation
Target of assay
16
control
1
histone
1
histone modification
1
narrow histone mark
Date released
92
August, 2021
11
April, 2019
6
May, 2019
5
March, 2020
3
February, 2020
3
July, 2019
1
February, 2023
1
October, 2019
Available data
98
tsv
16
bam
3
bedpe bed3+
3
hic
1
bed bedMethyl
1
bed narrowPeak
1
bigBed bedMethyl
1
bigWig
Organism
122
Homo sapiens
Biosample type
122
tissue
3
primary cell
2
cell line
Organ
134
kidney
123
liver
122
heart
119
pancreas
92
bone element
67
connective tissue
66
adipose tissue
62
brain
53
eye
40
musculature of body
28
blood vessel
28
vasculature
26
limb
15
epithelium
12
nerve
11
artery
9
spleen
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
122
AMP
Genome assembly (visualization)
GRCh38
113
hg19
Lab
122
AMP-T2D consortium
assembly!
GRCh38
award.project!
LungMap
BIOSAMPLE
ASSAY
122 results
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single cell RNA-seq
ChIP-seq
Hi-C
pCHi-C
total RNA-seq
WGBS
RRBS
tissue
heart left ventricle
18
7
1
1
2
1
heart right ventricle
17
2
1
1
right cardiac atrium
18
1
1
left cardiac atrium
18
aortic valve
4
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