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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ChIP-seq
70
ATAC-seq
5
FAIRE-seq
2
DNase-seq
Assay category
70
DNA accessibility
Date released
38
May, 2022
30
February, 2023
2
August, 2021
Available data
85
bigWig
70
bed narrowPeak
64
bam
39
zippedFastqFolder
19
fastq
14
tsv
10
bed bed3
7
bed bedgraph
bed bed3+
3
bigBed narrowPeak
3
txt
1
bed broadPeak
Organism
70
Homo sapiens
Biosample type
66
tissue
4
in vitro differentiated cells
Organ
27
eye
20
liver
18
pancreas
12
epithelium
3
connective tissue
1
adipose tissue
Project
70
AMP
Genome assembly (visualization)
GRCh38
179
hg19
Lab
28
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
70 results
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ATAC-seq
tissue
liver
20
islet of Langerhans
18
retina
15
pigmented layer of retina
12
adipose tissue
1
in vitro differentiated cells
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
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