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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
21
ATAC-seq
9
total RNA-seq
1
DNAme array
Assay category
45
DNA binding
21
DNA accessibility
9
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
9
control
5
RNA binding protein
Date released
198
August, 2021
138
August, 2017
126
May, 2020
106
October, 2019
102
February, 2021
93
November, 2017
76
May, 2021
46
March, 2020
41
February, 2023
29
October, 2018
28
May, 2022
27
July, 2019
25
February, 2020
23
May, 2019
17
December, 2017
15
April, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
8
November, 2018
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
November, 2019
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
40
bigWig
bed narrowPeak
2
bed bed3+
1
bam
1
tagAlign
Organism
76
Homo sapiens
Biosample type
48
in vitro differentiated cells
16
cell line
11
primary cell
1
tissue
Organ
18
pancreas
17
epithelium
Project
76
AMP
17
T1D
Genome assembly (visualization)
132
hg19
GRCh38
Lab
53
Kyle Gaulton, UCSD
23
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
assembly!
GRCh38
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
5
pancreatic PP cell
1
cell line
EndoC_BH1
16
primary cell
CD8-positive, alpha-beta T cell
3
2
monocyte
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
tissue
pancreas
1
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