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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
294
control
42
transcription factor
18
histone
18
histone modification
12
narrow histone mark
8
RNA binding protein
6
broad histone mark
2
chromatin remodeller
1
recombinant protein
Date released
8
May, 2020
6
October, 2019
2
November, 2017
1
December, 2017
1
May, 2019
Available data
84
tagAlign
68
bigWig
64
bed narrowPeak
25
bed broadPeak
18
bam
4
bigBed broadPeak
4
fastq
1
bigBed narrowPeak
Organism
18
Homo sapiens
Biosample type
9
tissue
5
primary cell
3
cell line
1
in vitro differentiated cells
Organ
10
liver
5
blood vessel
5
epithelium
5
vasculature
5
vein
1
embryo
1
limb
1
musculature of body
1
pancreas
Project
18
AMP
Genome assembly (visualization)
GRCh38
727
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
assembly!
GRCh38
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
tissue
liver
8
muscle of leg
1
primary cell
endothelial cell of umbilical vein
5
cell line
HepG2
2
Panc1
1
in vitro differentiated cells
pancreatic endoderm
1
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