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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
3
Hi-C
1
FAIRE-seq
Assay category
13
DNA accessibility
3
3D chromatin structure
Date released
12
February, 2023
3
October, 2022
1
October, 2019
Available data
80
zippedFastqFolder
76
fastq
33
bam
13
bed narrowPeak
10
tsv
9
bigWig
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
hdf5
2
tagAlign
1
bigBed narrowPeak
1
tar
Organism
16
Homo sapiens
Biosample type
12
tissue
4
primary cell
Organ
74
liver
29
pancreas
27
eye
16
epithelium
14
musculature of body
4
connective tissue
2
adipose tissue
2
brain
1
blood vessel
1
heart
1
kidney
1
limb
1
vasculature
1
vein
Project
13
AMP
3
HPAP
Genome assembly (visualization)
148
hg19
GRCh38
Lab
13
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assembly!
GRCh38
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
Hi-C
FAIRE-seq
tissue
pigmented layer of retina
12
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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