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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
FAIRE-seq
2
DNase-seq
1
ChIP-seq
Assay category
6
DNA accessibility
1
DNA binding
Target of assay
transcription factor
5
RNA binding protein
2
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
Date released
October, 2019
3
August, 2017
2
July, 2019
1
May, 2019
1
November, 2018
Available data
365
fastq
345
bam
200
tsv
185
bigWig
161
txt
153
zippedFastqFolder
143
tagAlign
140
bed narrowPeak
25
bed broadPeak
20
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
18
hic
15
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
7
bigBed narrowPeak
4
hdf5
3
bigBed broadPeak
3
cool
2
ibed
1
bedpe
1
vcf
Organism
7
Homo sapiens
Biosample type
5
tissue
2
primary cell
Organ
2
pancreas
1
brain
1
kidney
1
limb
1
musculature of body
Project
7
AMP
Genome assembly (visualization)
GRCh38
492
hg19
Lab
7
AMP-T2D consortium
assembly!
GRCh38
target.investigated_as!
transcription factor
month_released!
October, 2019
BIOSAMPLE
ASSAY
7 results
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FAIRE-seq
DNase-seq
ChIP-seq
tissue
frontal cortex
1
islet of Langerhans
1
kidney
1
muscle of leg
1
pancreas
1
primary cell
skeletal muscle myoblast
2
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