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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
3
Hi-C
Assay category
17
DNA methylation
3
3D chromatin structure
Date released
17
July, 2019
3
August, 2017
Available data
285
fastq
283
bam
188
tsv
161
txt
153
zippedFastqFolder
145
bigWig
111
bed narrowPeak
97
tagAlign
26
bed broadPeak
21
bedpe bed3+
20
hic
17
bed bedMethyl
17
bigBed bedMethyl
13
bed bed3+
12
bigBed narrowPeak
10
bed bed3
7
bed bedgraph
7
csv
4
bigBed broadPeak
3
cool
3
hdf5
2
ibed
1
bedpe
1
tar
Organism
20
Homo sapiens
Biosample type
12
primary cell
8
tissue
Organ
8
epithelium
5
brain
4
kidney
liver
3
musculature of body
3
vasculature
2
blood vessel
2
connective tissue
2
heart
2
pancreas
1
eye
1
pericardium
Project
20
AMP
Genome assembly (visualization)
21
hg19
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assembly!
GRCh38
organ_slims!
liver
BIOSAMPLE
ASSAY
20 results
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RRBS
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 7 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 2 more…
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