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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
151
ChIP-seq
Assay category
151
DNA binding
Target of assay
84
histone
84
histone modification
67
control
45
broad histone mark
39
narrow histone mark
Date released
68
August, 2017
31
May, 2020
24
November, 2017
9
October, 2019
8
August, 2021
8
October, 2017
3
February, 2021
May, 2021
Available data
432
bam
407
fastq
200
tsv
199
bigWig
161
txt
155
bed narrowPeak
153
zippedFastqFolder
151
tagAlign
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
13
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
150
Homo sapiens
Biosample type
122
tissue
21
in vitro differentiated cells
6
cell line
2
primary cell
Organ
55
liver
36
brain
22
connective tissue
15
musculature of body
10
pancreas
8
adipose tissue
2
artery
2
blood vessel
2
heart
2
vasculature
1
epithelium
Project
151
AMP
Genome assembly (visualization)
GRCh38
149
hg19
Lab
151
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
assembly!
GRCh38
month_released!
May, 2021
BIOSAMPLE
ASSAY
151 results
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ChIP-seq
tissue
liver
51
skeletal muscle tissue
15
islet of Langerhans
9
brain
8
cingulate gyrus
8
+ See 15 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
cell line
HepG2
3
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
hepatocyte
1
skeletal muscle myoblast
1
See all biosamples
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