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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
1
FAIRE-seq
1
whole genome sequencing assay
Assay category
3
DNA binding
1
DNA accessibility
1
DNA sequencing
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
1
August, 2021
1
October, 2019
Available data
433
bam
407
fastq
239
bigWig
200
tsv
185
bed narrowPeak
161
txt
153
zippedFastqFolder
152
tagAlign
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
15
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
5
Homo sapiens
Biosample type
4
cell line
1
primary cell
Organ
4
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
5
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
assembly!
GRCh38
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
FAIRE-seq
whole genome sequencing assay
cell line
HepG2
3
1
primary cell
endothelial cell of umbilical vein
1
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