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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
ATAC-seq
1
DNase-seq
1
whole genome sequencing assay
Assay category
DNA binding
2
DNA accessibility
1
DNA sequencing
Date released
1
August, 2017
1
August, 2021
1
March, 2019
Available data
202
fastq
200
tsv
161
txt
153
zippedFastqFolder
103
bigWig
79
bam
77
bed narrowPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
15
bed bed3+
10
bed bed3
10
bigBed narrowPeak
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
bed broadPeak
2
ibed
1
bedpe
1
bigBed broadPeak
1
tar
1
vcf
Organism
3
Homo sapiens
Biosample type
1
cell line
1
primary cell
1
tissue
Organ
1
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
GRCh38
184
hg19
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
assembly!
GRCh38
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
DNase-seq
whole genome sequencing assay
cell line
HepG2
1
primary cell
skeletal muscle myoblast
1
tissue
islet of Langerhans
1
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