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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ATAC-seq
31
ChIP-seq
4
FAIRE-seq
Assay category
70
DNA accessibility
31
DNA binding
Target of assay
31
histone
31
histone modification
19
narrow histone mark
12
broad histone mark
Date released
38
May, 2022
28
February, 2023
21
August, 2017
8
May, 2020
2
July, 2019
1
April, 2019
1
May, 2019
1
November, 2017
1
November, 2018
Available data
204
bam
159
tsv
157
txt
122
tagAlign
101
bed narrowPeak
97
fastq
60
bigWig
22
bed broadPeak
11
hic
10
bedpe bed3+
9
bed bedMethyl
9
bigBed bedMethyl
6
bigBed narrowPeak
6
csv
5
bed bed3
1
bed bed3+
1
bedpe
0
vcf
Organism
101
Homo sapiens
Biosample type
101
tissue
47
cell line
34
primary cell
4
in vitro differentiated cells
Organ
28
liver
27
eye
26
pancreas
14
musculature of body
12
epithelium
2
adipose tissue
2
brain
2
connective tissue
1
heart
1
kidney
1
limb
Project
101
AMP
Genome assembly (visualization)
GRCh38
777
hg19
Lab
63
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
assembly!
GRCh38
BIOSAMPLE
ASSAY
101 results
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ATAC-seq
ChIP-seq
FAIRE-seq
tissue
liver
20
8
islet of Langerhans
18
6
1
retina
15
skeletal muscle tissue
13
pigmented layer of retina
12
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