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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
48
snATAC-seq
47
WGBS
39
ATAC-seq
Hi-C
Assay category
177
Transcription
87
DNA accessibility
47
DNA methylation
Date released
134
May, 2022
76
February, 2023
56
September, 2020
45
February, 2021
Available data
159
fastq
153
zippedFastqFolder
6
tsv
Organism
311
Homo sapiens
Biosample type
311
primary cell
Organ
139
epithelium
139
pancreas
Project
311
HPAP
Genome assembly (visualization)
GRCh38
Lab
1069
AMP-T2D consortium
311
Klaus Kaestner, Upenn
163
Kyle Gaulton, UCSD
66
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
34
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
27
audit script error
assembly!
GRCh38
assay_title!
Hi-C
BIOSAMPLE
ASSAY
311 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
31
22
pancreatic beta cell
11
16
13
exocrine cell
39
pancreatic acinar cell
4
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