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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
19
ChIP-seq
7
total RNA-seq
4
ATAC-seq
4
Hi-C
1
pCHi-C
Assay category
19
DNA binding
7
Transcription
4
3D chromatin structure
4
DNA accessibility
Target of assay
17
control
2
histone
2
histone modification
2
narrow histone mark
Date released
84
February, 2021
17
October, 2019
8
February, 2023
4
July, 2019
3
February, 2020
2
May, 2019
1
May, 2021
Available data
88
txt
18
bam
4
bed bed3
3
tsv
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
Organism
119
Homo sapiens
Biosample type
118
tissue
1
primary cell
Organ
311
pancreas
260
liver
229
epithelium
146
kidney
127
heart
118
connective tissue
93
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
118
AMP
1
T1D
Genome assembly (visualization)
160
hg19
GRCh38
Lab
118
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assembly!
GRCh38
month_released!
December, 2019
BIOSAMPLE
ASSAY
119 results
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RNA microarray
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
pCHi-C
tissue
bone element
84
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
1
4
acetabular part of hip bone
1
1
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primary cell
megakaryocyte
1
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