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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
17
ChIP-seq
16
total RNA-seq
Assay category
56
Transcription
17
DNA binding
Target of assay
16
control
1
histone
1
histone modification
1
narrow histone mark
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
55
fastq
19
zippedFastqFolder
17
bam
Organism
73
Homo sapiens
Biosample type
56
primary cell
12
tissue
5
in vitro differentiated cells
Organ
19
epithelium
16
pancreas
13
liver
4
embryo
Project
56
HPAP
17
AMP
Genome assembly (visualization)
GRCh38
77
hg19
Lab
56
Klaus Kaestner, Upenn
17
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
GRCh38
BIOSAMPLE
ASSAY
73 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic beta cell
1
tissue
liver
9
right lobe of liver
3
in vitro differentiated cells
Hepatic endoderm
2
pancreatic endoderm
2
hepatocyte
1
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