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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
pCHi-C
18
Hi-C
15
RRBS
4
ATAC-seq
4
WGBS
2
FAIRE-seq
2
total RNA-seq
Assay category
19
DNA methylation
18
3D chromatin structure
6
DNA accessibility
2
Transcription
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
32
tsv
15
bed bedMethyl
15
bigBed bedMethyl
12
bedpe bed3+
10
bigWig
10
hic
4
bed bed3+
4
hdf5
3
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
ibed
Organism
77
Homo sapiens
Biosample type
47
tissue
14
primary cell
6
cell line
6
in vitro differentiated cells
4
stem cell
Organ
11
epithelium
10
pancreas
9
heart
8
brain
8
musculature of body
7
kidney
7
vasculature
6
blood vessel
5
liver
4
connective tissue
4
limb
2
intestine
1
adipose tissue
1
adrenal gland
1
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
75
AMP
2
T1D
Genome assembly (visualization)
123
hg19
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
77 results
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Clear Filters
pCHi-C
Hi-C
RRBS
ATAC-seq
WGBS
FAIRE-seq
total RNA-seq
tissue
heart left ventricle
1
1
1
2
islet of Langerhans
1
2
2
gastrocnemius medialis
4
aorta
1
1
1
pancreas
1
1
1
+ See 22 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 9 more…
cell line
EndoC_BH1
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
embryonic stem cell
1
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
See all biosamples
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