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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
33
ChIP-seq
2
Hi-C
2
total RNA-seq
1
pCHi-C
Assay category
100
DNA accessibility
33
DNA binding
2
3D chromatin structure
2
Transcription
Target of assay
25
control
8
histone
8
histone modification
8
narrow histone mark
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
78
bam
53
bigWig
31
tagAlign
8
bed narrowPeak
2
bedpe bed3+
2
hic
1
tsv
Organism
138
Homo sapiens
Biosample type
102
primary cell
32
tissue
4
cell line
Organ
32
liver
4
pancreas
3
epithelium
Project
138
AMP
Genome assembly (visualization)
319
hg19
GRCh38
Lab
138
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
138 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
total RNA-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
tissue
liver
31
islet of Langerhans
1
cell line
EndoC_BH1
2
1
HepG2
1
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