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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
21
ATAC-seq
6
total RNA-seq
1
pCHi-C
Assay category
38
DNA binding
21
DNA accessibility
6
Transcription
Target of assay
20
histone
20
histone modification
12
transcription factor
10
broad histone mark
10
narrow histone mark
6
control
5
RNA binding protein
Date released
213
August, 2021
145
August, 2017
123
November, 2017
101
February, 2021
95
October, 2019
82
February, 2023
66
May, 2021
66
May, 2022
47
March, 2020
47
September, 2023
32
May, 2020
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
July, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
January, 2018
8
January, 2021
8
November, 2018
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
5
bigWig
1
bam
1
tagAlign
Organism
66
Homo sapiens
Biosample type
primary cell
48
in vitro differentiated cells
16
cell line
2
tissue
Organ
18
pancreas
17
epithelium
1
thymus
Project
65
AMP
1
T1D
Genome assembly (visualization)
132
hg19
GRCh38
Lab
49
Kyle Gaulton, UCSD
17
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
assembly!
GRCh38
biosample_type!
primary cell
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
pCHi-C
in vitro differentiated cells
embryonic stem cell
37
5
5
pancreatic PP cell
1
cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
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