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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
9
ChIP-seq
Assay category
56
Transcription
9
DNA binding
Target of assay
6
histone
6
histone modification
5
broad histone mark
3
control
1
narrow histone mark
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
41
fastq
19
zippedFastqFolder
8
tagAlign
2
bam
Organism
65
Homo sapiens
Biosample type
56
primary cell
9
tissue
Organ
16
epithelium
16
pancreas
9
brain
Project
56
HPAP
9
AMP
Genome assembly (visualization)
GRCh38
13
hg19
Lab
56
Klaus Kaestner, Upenn
9
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
GRCh38
BIOSAMPLE
ASSAY
65 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic beta cell
1
tissue
brain
9
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