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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
14
total RNA-seq
4
Hi-C
4
pCHi-C
2
DNase-seq
1
FAIRE-seq
Assay category
DNA binding
19
DNA accessibility
14
Transcription
4
3D chromatin structure
Date released
200
May, 2022
187
August, 2021
170
February, 2023
144
February, 2021
103
May, 2020
56
September, 2020
48
March, 2020
48
May, 2021
47
September, 2023
41
October, 2019
29
July, 2019
25
February, 2020
19
April, 2020
17
August, 2017
16
January, 2021
10
November, 2020
8
January, 2018
5
December, 2019
4
July, 2018
4
March, 2023
4
October, 2022
3
March, 2019
3
May, 2023
2
November, 2018
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
September, 2018
Available data
4
bigBed narrowPeak
4
bigWig
4
hic
3
bedpe bed3+
1
bam
1
bed narrowPeak
1
tar
Organism
41
Homo sapiens
Biosample type
33
tissue
4
in vitro differentiated cells
4
primary cell
Organ
19
eye
4
epithelium
3
connective tissue
3
pancreas
2
blood vessel
2
kidney
2
vasculature
2
vein
1
adipose tissue
1
brain
1
heart
1
pituitary gland
1
skin of body
Project
41
AMP
Genome assembly (visualization)
39
hg19
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
assembly!
GRCh38
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
13
14
4
adipose tissue
1
heart
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
endothelial cell of umbilical vein
1
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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