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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
CRISPR genome editing followed by sgRNA sequencing
1
ChIP-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snATAC-seq
Assay category
2
Transcription
1
DNA accessibility
1
DNA binding
Target of assay
1
control
Date released
2
March, 2023
1
April, 2020
1
August, 2017
1
February, 2023
1
October, 2022
Available data
1
bam
1
fastq
1
tagAlign
1
txt
Organism
Homo sapiens
Biosample type
4
cell line
stem cell
2
tissue
Organ
2
pancreas
adipose tissue
1
connective tissue
1
epithelium
1
lung
Project
3
AMP
2
community
1
LungMap
Genome assembly (visualization)
GRCh38
6
hg19
Lab
3
AMP-T2D consortium
2
Anna Gloyn, Oxford
1
Xin Sun, UCSD
assembly!
GRCh38
organ_slims!
adipose tissue
biosample_type!
stem cell
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
BIOSAMPLE
ASSAY
6 results
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CRISPR genome editing followed by sgRNA sequencing
ChIP-seq
MPRA
shRNA RNA-seq
siRNA RNA-seq
snATAC-seq
cell line
EndoC-BH1
1
1
EndoC_BH1
1
MIN6
1
tissue
lung
1
pancreas
1
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