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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
1
single cell RNA-seq
Assay category
7
DNA binding
3
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
6
control
1
recombinant protein
1
transcription factor
Date released
213
August, 2021
200
May, 2022
169
February, 2023
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
121
August, 2017
106
October, 2019
56
September, 2020
47
March, 2020
47
September, 2023
29
July, 2019
24
May, 2019
23
February, 2020
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
11
October, 2018
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
June, 2019
7
January, 2018
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2022
1
September, 2018
Available data
10
fastq
9
bam
1
bed broadPeak
1
bed narrowPeak
1
bedpe
1
bigBed narrowPeak
1
bigWig
1
csv
1
hic
Organism
12
Homo sapiens
Biosample type
7
tissue
4
cell line
1
primary cell
Organ
4
pancreas
3
blood
3
bodily fluid
3
spleen
1
liver
Project
12
AMP
Genome assembly (visualization)
GRCh38
73
hg19
Lab
9
AMP-T2D consortium
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
1
missing controlled_by
assembly!
GRCh38
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ChIP-seq
ATAC-seq
FAIRE-seq
Hi-C
single cell RNA-seq
tissue
islet of Langerhans
2
1
spleen
3
pancreas
1
cell line
GM12878
3
HepG2
1
primary cell
pancreatic cell
1
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