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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
107
control
52
transcription factor
33
histone
33
histone modification
19
narrow histone mark
14
broad histone mark
7
RNA binding protein
2
chromatin remodeller
1
recombinant protein
Date released
8
August, 2017
8
May, 2020
2
August, 2021
1
November, 2017
Available data
15
tagAlign
11
bigWig
10
bed narrowPeak
9
bam
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
19
Homo sapiens
Biosample type
16
tissue
3
cell line
Organ
19
liver
16
connective tissue
adipose tissue
10
brain
8
musculature of body
6
pancreas
4
gonad
4
ovary
2
eye
2
limb
1
blood vessel
1
embryo
1
epithelium
1
heart
1
lymph node
1
vasculature
1
vein
Project
19
AMP
Genome assembly (visualization)
52
hg19
GRCh38
Lab
17
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
inconsistent control read length
assembly!
GRCh38
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
tissue
liver
16
cell line
HepG2
3
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