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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ATAC-seq
73
total RNA-seq
61
ChIP-seq
47
WGBS
11
snATAC-seq
10
MeRIP-seq
8
Hi-C
2
Capture-C
2
FAIRE-seq
2
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
73
Transcription
Date released
42
February, 2023
16
September, 2020
6
May, 2022
4
July, 2018
2
March, 2020
1
August, 2021
1
February, 2020
1
May, 2021
Available data
59
fastq
6
bam
6
txt
2
tsv
Organism
73
Homo sapiens
Biosample type
53
primary cell
20
tissue
Organ
73
pancreas
55
epithelium
49
kidney
30
liver
19
eye
12
brain
6
connective tissue
4
bone element
4
skeleton
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
musculature of body
1
nerve
1
spinal cord
Project
53
HPAP
13
AMP
7
T1D
Genome assembly (visualization)
GRCh38
330
hg19
Lab
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
7
AMP-T2D consortium
1
Bing Ren, UCSD
assembly!
GRCh38
organ_slims!
bone marrow
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
primary cell
pancreatic alpha cell
42
pancreatic beta cell
11
tissue
islet of Langerhans
18
body of pancreas
1
pancreas
1
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