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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
ChIP-seq
Assay category
125
DNA binding
Target of assay
70
control
40
transcription factor
15
histone
15
histone modification
10
narrow histone mark
6
RNA binding protein
5
broad histone mark
2
chromatin remodeller
Date released
208
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
145
February, 2021
134
May, 2020
125
November, 2017
123
May, 2021
89
October, 2019
56
September, 2020
47
September, 2023
44
March, 2020
29
October, 2018
26
July, 2019
22
February, 2020
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
13
May, 2019
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
111
bam
100
fastq
54
bigWig
33
bed narrowPeak
32
bigBed narrowPeak
24
tagAlign
15
bed broadPeak
14
bigBed broadPeak
3
tar
Organism
125
Homo sapiens
Biosample type
98
cell line
25
tissue
2
primary cell
Organ
98
liver
28
brain
2
epithelium
2
vasculature
blood vessel
Project
125
AMP
Genome assembly (visualization)
GRCh38
278
hg19
Lab
125
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
4
inconsistent control read length
2
inconsistent control run_type
assembly!
GRCh38
organ_slims!
ovary
blood vessel
BIOSAMPLE
ASSAY
125 results
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Clear Filters
ChIP-seq
cell line
HepG2
98
tissue
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
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