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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
4
single cell RNA-seq
3
Hi-C
1
RRBS
1
WGBS
1
pCHi-C
1
total RNA-seq
Assay category
11
DNA binding
5
Transcription
3
3D chromatin structure
2
DNA methylation
Target of assay
11
control
Date released
9
May, 2019
4
August, 2021
4
July, 2019
2
March, 2020
2
November, 2017
1
February, 2020
Available data
12
bam
6
tsv
4
bigWig
2
bed bed3+
2
fastq
2
hdf5
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
22
Homo sapiens
Biosample type
17
tissue
5
primary cell
Organ
311
pancreas
260
liver
230
epithelium
149
kidney
127
heart
118
connective tissue
93
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
artery
12
nerve
vein
9
spleen
8
embryo
8
skeleton
5
gonad
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
55
hg19
GRCh38
Lab
22
AMP-T2D consortium
assembly!
GRCh38
organ_slims!
vein
ovary
artery
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
single cell RNA-seq
Hi-C
RRBS
WGBS
pCHi-C
total RNA-seq
tissue
aorta
2
4
1
1
1
ascending aorta
3
1
thoracic aorta
4
primary cell
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
endothelial cell of hepatic sinusoid
1
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