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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
6
single cell RNA-seq
4
Hi-C
3
total RNA-seq
1
WGBS
1
pCHi-C
Assay category
14
DNA binding
9
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
14
control
Date released
October, 2019
11
May, 2019
6
August, 2021
3
February, 2020
3
July, 2019
3
March, 2020
2
February, 2021
1
November, 2017
Available data
15
bam
10
tsv
3
bigWig
2
bed bed3+
2
bedpe bed3+
2
hdf5
2
hic
2
tagAlign
1
fastq
Organism
29
Homo sapiens
Biosample type
23
tissue
4
primary cell
2
cell line
Organ
301
pancreas
260
liver
218
epithelium
141
kidney
126
heart
114
connective tissue
93
bone element
66
adipose tissue
61
brain
43
musculature of body
34
eye
31
vasculature
29
blood vessel
20
lung
15
blood
15
bodily fluid
9
limb
9
spleen
8
artery
8
embryo
8
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
29
AMP
Genome assembly (visualization)
GRCh38
122
hg19
Lab
29
AMP-T2D consortium
assembly!
GRCh38
month_released!
October, 2019
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
single cell RNA-seq
Hi-C
total RNA-seq
WGBS
pCHi-C
tissue
aorta
2
4
1
1
1
ascending aorta
3
1
thoracic aorta
4
coronary artery
2
1
pulmonary artery
2
+ See 1 more…
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
endothelial cell of umbilical vein
1
cell line
smooth muscle cell of the coronary artery
2
See all biosamples
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