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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
12
total RNA-seq
3
Hi-C
2
ATAC-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
Assay category
47
DNA binding
2
DNA accessibility
Target of assay
28
control
19
histone
19
histone modification
10
narrow histone mark
9
broad histone mark
Date released
28
November, 2017
9
October, 2017
8
October, 2019
3
May, 2019
1
February, 2023
Available data
36
tagAlign
27
bam
6
fastq
4
bigWig
1
bed bed3
1
bed broadPeak
1
bed narrowPeak
Organism
49
Homo sapiens
Biosample type
46
tissue
3
primary cell
Organ
212
liver
154
pancreas
101
epithelium
98
connective tissue
58
adipose tissue
49
brain
31
eye
27
musculature of body
27
vasculature
26
blood vessel
21
heart
19
limb
13
kidney
11
nerve
9
artery
8
spleen
7
blood
7
bodily fluid
7
embryo
7
vein
4
bone element
4
gonad
4
ovary
4
skeleton
1
lymph node
1
pituitary gland
1
skin of body
Project
49
AMP
Genome assembly (visualization)
GRCh38
124
hg19
Lab
49
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
GRCh38
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
ATAC-seq
tissue
brain
9
1
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
See all biosamples
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