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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
12
transcription factor
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
15
November, 2017
Available data
178
bam
128
fastq
102
bigWig
91
tagAlign
76
bed narrowPeak
33
bigBed narrowPeak
26
tsv
15
bed broadPeak
14
bigBed broadPeak
5
bed bed3+
4
bed bedMethyl
4
bigBed bedMethyl
4
hdf5
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
vcf
Organism
15
Homo sapiens
Biosample type
14
cell line
1
tissue
Organ
14
liver
13
musculature of body
7
pancreas
2
blood vessel
2
epithelium
2
vasculature
2
vein
1
adipose tissue
1
brain
1
connective tissue
Project
15
AMP
Genome assembly (visualization)
100
hg19
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assembly!
GRCh38
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
cell line
HepG2
14
tissue
cingulate gyrus
1
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