Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
19
total RNA-seq
9
ChIP-seq
8
snATAC-seq
4
pCHi-C
1
RRBS
Assay category
37
DNA accessibility
19
Transcription
9
DNA binding
1
DNA methylation
Target of assay
7
control
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
8
January, 2021
3
January, 2019
3
November, 2018
1
February, 2020
1
January, 2018
1
July, 2019
1
June, 2019
Available data
27
bed narrowPeak
7
bam
6
fastq
5
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
70
Homo sapiens
Biosample type
53
tissue
10
primary cell
7
cell line
Organ
311
pancreas
260
liver
230
epithelium
149
kidney
127
heart
118
connective tissue
93
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
62
AMP
8
T1D
Genome assembly (visualization)
89
hg19
GRCh38
Lab
62
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assembly!
GRCh38
BIOSAMPLE
ASSAY
70 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
snATAC-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
2
4
retina
15
3
pigmented layer of retina
12
2
primary cell
peripheral blood mononuclear cell
8
retinal pigment epithelial cell
1
1
cell line
GM12878
1
6
Download