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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
Assay category
82
DNA binding
Target of assay
322
control
159
histone
159
histone modification
82
narrow histone mark
77
broad histone mark
54
transcription factor
9
RNA binding protein
5
nucleotide modification
chromatin remodeller
1
recombinant protein
Date released
36
August, 2017
May, 2021
22
October, 2019
10
November, 2017
8
May, 2020
2
August, 2021
1
April, 2019
1
December, 2017
1
May, 2019
1
October, 2017
Available data
39
tagAlign
22
bigWig
21
bed narrowPeak
12
bam
10
bed broadPeak
2
fastq
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
82
Homo sapiens
Biosample type
73
tissue
5
in vitro differentiated cells
3
cell line
1
primary cell
Organ
19
liver
16
connective tissue
11
adipose tissue
10
brain
8
musculature of body
6
pancreas
4
gonad
4
ovary
2
eye
2
limb
1
blood vessel
1
embryo
1
epithelium
1
heart
1
lymph node
1
vasculature
1
vein
Project
82
AMP
Genome assembly (visualization)
GRCh38
359
hg19
Lab
80
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
assembly!
GRCh38
target.investigated_as!
chromatin remodeller
month_released!
May, 2021
BIOSAMPLE
ASSAY
82 results
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ChIP-seq
tissue
islet of Langerhans
27
liver
16
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
cingulate gyrus
4
+ See 7 more…
in vitro differentiated cells
adipocyte
4
pancreatic endoderm
1
cell line
HepG2
3
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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